RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44010.4 View Network Show in Genome Browser |
| Other Names | Os08g0554000 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27703403-27707248 Nucleotide Length: 1056 |
| Protein-coding | LOC_Os08g44010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g52780 LOC_Os07g08170 LOC_Os02g46320 LOC_Os01g62040 LOC_Os02g42660 LOC_Os03g38020 LOC_Os03g63720 LOC_Os07g09310 LOC_Os03g02680 LOC_Os03g01850 LOC_Os02g52370 More.. |
| Downstream Genes | LOC_Os12g04160 LOC_Os11g04370 LOC_Os10g25674 LOC_Os09g27340 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5809 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44010.4 |
| Rice Genome Annotation | LOC_Os08g44010.4 |
| Ricechip | LOC_Os08g44010.4 |
| KEGG | osa:4346273 dosa:Os08t0554000-02 |
| Entrez-Gene | 4346273 |