RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44020.1 View Network Show in Genome Browser |
| Other Names | Os08g0554100 |
| Description | rhamnogalacturonate lyase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27714041-27718701 Nucleotide Length: 1977 |
| Protein-coding | LOC_Os08g44020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g13660 LOC_Os01g61350 LOC_Os04g48460 LOC_Os01g12530 LOC_Os06g41060 |
| Downstream Genes | LOC_Os10g07080 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44020.1 |
| Rice Genome Annotation | LOC_Os08g44020.1 |
| Ricechip | LOC_Os08g44020.1 |
| KEGG | osa:4346274 dosa:Os08t0554100-01 |
| Entrez-Gene | 4346274 |