RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44210.1 View Network Show in Genome Browser |
| Other Names | Os08g0556200 |
| Description | dihydroneopterin aldolase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27832991-27834136 Nucleotide Length: 408 |
| Protein-coding | LOC_Os08g44210 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g42632 LOC_Os04g56710 LOC_Os05g10630 LOC_Os02g09590 LOC_Os07g09470 LOC_Os03g14280 LOC_Os02g32520 LOC_Os04g32560 LOC_Os02g46990 LOC_Os01g62500 LOC_Os06g45820 More.. |
| Downstream Genes | LOC_Os12g29990 LOC_Os12g28460 LOC_Os12g12850 LOC_Os12g28177 LOC_Os12g28137 LOC_Os09g26260 LOC_Os12g24320 LOC_Os12g28550 LOC_Os11g16770 LOC_Os11g16590 LOC_Os12g01360 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1439 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00790 rn01100 |
| Metacyc Pathways | FOLSYN-PWY PWY-3742 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44210.1 |
| Rice Genome Annotation | LOC_Os08g44210.1 |
| Ricechip | LOC_Os08g44210.1 |
| KEGG | osa:4346285 dosa:Os08t0556200-01 |
| Entrez-Gene | 4346285 |