RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44280.1 View Network Show in Genome Browser |
| Other Names | Os08g0557000 |
| Description | protein-L-isoaspartate O-methyltransferase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27877343-27880682 Nucleotide Length: 753 |
| Protein-coding | LOC_Os08g44280 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009791 | post-embryonic development | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g10460 LOC_Os01g51280 LOC_Os01g66360 LOC_Os01g56620 LOC_Os02g45660 LOC_Os07g34589 LOC_Os01g58220 LOC_Os05g41900 LOC_Os02g42660 LOC_Os01g43020 LOC_Os08g09240 More.. |
| Downstream Genes | LOC_Os09g37600 LOC_Os12g36950 LOC_Os10g08550 LOC_Os09g20820 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44280.1 |
| Rice Genome Annotation | LOC_Os08g44280.1 |
| Ricechip | LOC_Os08g44280.1 |
| KEGG | osa:4346293 dosa:Os08t0557000-01 |
| Entrez-Gene | 4346293 |