RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44290.1 View Network Show in Genome Browser |
| Other Names | Os08g0557100 |
| Description | RNA recognition motif containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27879590-27882184 Nucleotide Length: 918 |
| Protein-coding | LOC_Os08g44290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g43120 LOC_Os01g58470 LOC_Os03g45400 LOC_Os03g20100 LOC_Os07g38300 LOC_Os01g48690 LOC_Os03g61220 LOC_Os02g02390 LOC_Os03g17580 LOC_Os03g52640 LOC_Os01g72800 More.. |
| Downstream Genes | LOC_Os11g41910 LOC_Os12g35630 LOC_Os12g37610 LOC_Os11g26160 LOC_Os09g33870 LOC_Os09g29980 LOC_Os10g34380 LOC_Os11g23790 LOC_Os12g38430 LOC_Os10g06130 LOC_Os10g02630 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44290.1 |
| Rice Genome Annotation | LOC_Os08g44290.1 |
| Ricechip | LOC_Os08g44290.1 |
| KEGG | osa:4346294 dosa:Os08t0557100-02 |
| Entrez-Gene | 4346294 |