RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44320.1 View Network Show in Genome Browser |
| Other Names | Os08g0557400 |
| Description | low molecular weight protein-tyrosine-phosphatase slr0328, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27888895-27893038 Nucleotide Length: 807 |
| Protein-coding | LOC_Os08g44320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os04g51570 LOC_Os04g36890 LOC_Os06g43850 LOC_Os08g06530 LOC_Os03g08450 LOC_Os06g04270 LOC_Os02g06592 LOC_Os08g09240 LOC_Os04g53240 LOC_Os07g47630 LOC_Os07g34589 More.. |
| Downstream Genes | LOC_Os09g08430 LOC_Os09g08660 LOC_Os12g06670 LOC_Os10g34380 LOC_Os11g14220 LOC_Os12g39980 LOC_Os10g17280 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5075 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44320.1 |
| Rice Genome Annotation | LOC_Os08g44320.1 |
| Ricechip | LOC_Os08g44320.1 |
| KEGG | osa:4346297 dosa:Os08t0557400-01 |
| Entrez-Gene | 4346297 |