RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44330.2 View Network Show in Genome Browser |
| Other Names | Os08g0557500 |
| Description | peptidylprolyl isomerase domain and WD repeat-containing protein 1, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27893344-27898831 Nucleotide Length: 1542 |
| Protein-coding | LOC_Os08g44330 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009653 | anatomical structure morphogenesis | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0040007 | growth | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0003682 | chromatin binding | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os03g01090 LOC_Os01g67040 LOC_Os03g22900 |
| Downstream Genes | LOC_Os12g38860 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44330.2 |
| Rice Genome Annotation | LOC_Os08g44330.2 |
| Ricechip | LOC_Os08g44330.2 |
| KEGG | osa:4346298 dosa:Os08t0557500-01 |
| Entrez-Gene | 4346298 |