RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44350.1 View Network Show in Genome Browser |
| Other Names | Os08g0557700 |
| Description | histidine-containing phosphotransfer protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27904573-27909555 Nucleotide Length: 444 |
| Protein-coding | LOC_Os08g44350 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016049 | cell growth | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g08440 LOC_Os03g49500 LOC_Os03g12350 LOC_Os02g55320 |
| Downstream Genes | LOC_Os12g04500 LOC_Os11g04720 |
| Reference | |
|---|---|
| PubMed | 16919402 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44350.1 |
| Rice Genome Annotation | LOC_Os08g44350.1 |
| Ricechip | LOC_Os08g44350.1 |
| KEGG | osa:4346300 dosa:Os08t0557700-01 |
| Entrez-Gene | 4346300 |