RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44410.1 View Network Show in Genome Browser |
| Other Names | Os08g0558300 |
| Description | harpin-induced protein 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27942021-27943194 Nucleotide Length: 579 |
| Protein-coding | LOC_Os08g44410 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g33030 LOC_Os02g15810 LOC_Os03g39020 LOC_Os08g40170 LOC_Os03g46920 LOC_Os01g15480 LOC_Os01g70560 LOC_Os02g47150 LOC_Os01g67110 LOC_Os04g41900 LOC_Os01g59120 More.. |
| Downstream Genes | LOC_Os08g44420 LOC_Os11g37100 LOC_Os12g02710 LOC_Os11g02740 LOC_Os12g31810 LOC_Os12g06260 LOC_Os11g05870 LOC_Os10g01570 LOC_Os09g38450 LOC_Os12g24550 LOC_Os09g38710 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44410.1 |
| Rice Genome Annotation | LOC_Os08g44410.1 |
| Ricechip | LOC_Os08g44410.1 |
| KEGG | osa:4346306 dosa:Os08t0558300-00 |
| Entrez-Gene | 4346306 |