RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44510.1 View Network Show in Genome Browser |
| Other Names | Os08g0559300 |
| Description | UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SPINDLY, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27991556-27999425 Nucleotide Length: 2784 |
| Protein-coding | LOC_Os08g44510 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g51730 LOC_Os07g49000 LOC_Os07g06710 LOC_Os03g22140 LOC_Os03g19200 LOC_Os01g42960 LOC_Os05g31062 LOC_Os06g11320 LOC_Os08g41390 LOC_Os01g08700 LOC_Os03g50010 More.. |
| Downstream Genes | LOC_Os10g34540 LOC_Os09g36740 LOC_Os11g05090 LOC_Os10g36250 LOC_Os12g05090 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00563 rn01100 |
| Metacyc Pathways | PWY-5338 PWY-2901 PWY-2881 PWY-2902 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44510.1 |
| Rice Genome Annotation | LOC_Os08g44510.1 |
| Ricechip | LOC_Os08g44510.1 |
| KEGG | osa:4346315 dosa:Os08t0559300-01 |
| Entrez-Gene | 4346315 |