RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44520.3 View Network Show in Genome Browser |
| Other Names | Os08g0559400 |
| Description | peptidyl-prolyl cis-trans isomerase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 27999765-28002348 Nucleotide Length: 495 |
| Protein-coding | LOC_Os08g44520 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g29370 LOC_Os07g37830 LOC_Os03g01090 LOC_Os02g52250 LOC_Os06g44060 LOC_Os08g08040 LOC_Os03g05720 LOC_Os08g04280 LOC_Os07g07310 LOC_Os01g67040 LOC_Os02g39050 More.. |
| Downstream Genes | LOC_Os12g07720 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR3979-3p |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44520.3 |
| Rice Genome Annotation | LOC_Os08g44520.3 |
| Ricechip | LOC_Os08g44520.3 |
| KEGG | osa:4346316 dosa:Os08t0559400-01 |
| Entrez-Gene | 4346316 |