RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44530.1 View Network Show in Genome Browser |
| Other Names | Os08g0559600 |
| Description | dihydroxy-acid dehydratase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28004851-28009381 Nucleotide Length: 1785 |
| Protein-coding | LOC_Os08g44530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g59990 LOC_Os05g40820 LOC_Os02g01560 LOC_Os01g25610 LOC_Os07g42450 LOC_Os02g30630 LOC_Os07g33997 LOC_Os07g33921 LOC_Os07g33898 LOC_Os07g26740 LOC_Os03g60400 More.. |
| Downstream Genes | LOC_Os12g17910 LOC_Os09g08430 LOC_Os12g07010 LOC_Os09g24690 LOC_Os11g06750 LOC_Os10g34180 LOC_Os10g27174 LOC_Os10g41470 LOC_Os09g32976 LOC_Os10g32920 LOC_Os12g01430 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00290 rn01100 rn01110 rn01210 rn00770 |
| Metacyc Pathways | ILEUSYN-PWY VALSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44530.1 |
| Rice Genome Annotation | LOC_Os08g44530.1 |
| Ricechip | LOC_Os08g44530.1 |
| KEGG | osa:4346318 dosa:Os08t0559600-01 |
| Entrez-Gene | 4346318 |