RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g44810.1 View Network Show in Genome Browser |
| Other Names | Os08g0562100 |
| Description | lactate/malate dehydrogenase, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28141042-28146270 Nucleotide Length: 1302 |
| Protein-coding | LOC_Os08g44810 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005576 | extracellular region | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g01510 LOC_Os08g16480 LOC_Os03g63500 LOC_Os08g02640 LOC_Os07g38970 LOC_Os05g06750 LOC_Os01g22520 LOC_Os07g04240 LOC_Os01g23610 LOC_Os04g32020 LOC_Os07g49520 More.. |
| Downstream Genes | LOC_Os09g20440 LOC_Os09g13600 LOC_Os09g26810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g44810.1 |
| Rice Genome Annotation | LOC_Os08g44810.1 |
| Ricechip | LOC_Os08g44810.1 |
| KEGG | osa:4346332 dosa:Os08t0562100-01 |
| Entrez-Gene | 4346332 |