RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g45010.1 View Network Show in Genome Browser |
| Other Names | Os08g0564100 |
| Description | ABC transporter, ATP-binding protein, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28250419-28254009 Nucleotide Length: 1779 |
| Protein-coding | LOC_Os08g45010 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g49220 LOC_Os03g07840 LOC_Os07g43470 LOC_Os03g58810 LOC_Os04g51630 LOC_Os03g44780 LOC_Os02g58020 LOC_Os08g13690 LOC_Os03g20170 LOC_Os02g53500 LOC_Os03g31300 More.. |
| Downstream Genes | LOC_Os12g41400 LOC_Os12g07740 LOC_Os09g27420 LOC_Os10g26130 LOC_Os12g28177 LOC_Os12g28137 LOC_Os12g07720 LOC_Os10g32550 LOC_Os10g31864 LOC_Os12g28590 LOC_Os09g32976 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g45010.1 |
| Rice Genome Annotation | LOC_Os08g45010.1 |
| Ricechip | LOC_Os08g45010.1 |
| KEGG | osa:4346343 dosa:Os08t0564100-01 |
| Entrez-Gene | 4346343 |