RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g45040.1 View Network Show in Genome Browser |
| Other Names | Os08g0564500 |
| Description | zinc finger protein 593, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28272060-28273937 Nucleotide Length: 375 |
| Protein-coding | LOC_Os08g45040 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g61640 LOC_Os03g15700 LOC_Os02g02360 LOC_Os03g22890 LOC_Os01g40110 LOC_Os02g26850 LOC_Os02g16640 LOC_Os06g09570 LOC_Os01g27730 LOC_Os03g50850 LOC_Os03g37330 More.. |
| Downstream Genes | LOC_Os12g31840 LOC_Os10g36470 LOC_Os12g09280 LOC_Os09g25430 LOC_Os10g01540 LOC_Os11g38170 LOC_Os12g42150 LOC_Os11g01420 LOC_Os11g24610 LOC_Os12g01430 LOC_Os12g16350 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g45040.1 |
| Rice Genome Annotation | LOC_Os08g45040.1 |
| Ricechip | LOC_Os08g45040.1 |
| KEGG | osa:4346346 dosa:Os08t0564500-01 |
| Entrez-Gene | 4346346 |