RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g45180.1 View Network Show in Genome Browser |
| Other Names | Os08g0566400 |
| Description | kinase, pfkB family, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28370568-28375965 Nucleotide Length: 1197 |
| Protein-coding | LOC_Os08g45180 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g07160 LOC_Os01g21380 LOC_Os02g13140 LOC_Os07g25590 LOC_Os05g09370 LOC_Os07g07220 LOC_Os08g38160 LOC_Os07g13800 LOC_Os06g18790 LOC_Os05g42060 LOC_Os04g44354 More.. |
| Downstream Genes | LOC_Os12g10560 LOC_Os12g07290 LOC_Os12g35890 LOC_Os10g18530 LOC_Os09g34230 LOC_Os10g18480 LOC_Os10g18510 LOC_Os12g40830 LOC_Os09g20590 LOC_Os11g03670 LOC_Os12g28270 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00030 |
| Metacyc Pathways | RIBOKIN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g45180.1 |
| Rice Genome Annotation | LOC_Os08g45180.1 |
| Ricechip | LOC_Os08g45180.1 |
| KEGG | osa:4346357 dosa:Os08t0566400-01 |
| Entrez-Gene | 4346357 |