RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os08g45190.1 View Network Show in Genome Browser |
| Other Names | Os08g0566600 |
| Description | PGR5, putative, expressed |
| Gene Attributes | Chromosome: Chr8 CDS Coordinates (5'-3'): 28377770-28378921 Nucleotide Length: 378 |
| Protein-coding | LOC_Os08g45190 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| GO:0009579 | thylakoid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g29170 LOC_Os01g40710 LOC_Os02g38020 LOC_Os04g36720 LOC_Os05g22730 LOC_Os05g33270 LOC_Os02g52650 LOC_Os03g17660 LOC_Os05g43650 LOC_Os04g44650 LOC_Os02g42570 More.. |
| Downstream Genes | LOC_Os12g35670 LOC_Os11g47730 LOC_Os10g41780 |
| Reference | |
|---|---|
| PubMed | 23161858 |
| Database Links | |
|---|---|
| Gramene | LOC_Os08g45190.1 |
| Rice Genome Annotation | LOC_Os08g45190.1 |
| Ricechip | LOC_Os08g45190.1 |
| KEGG | osa:4346358 dosa:Os08t0566600-01 |
| Entrez-Gene | 4346358 |