RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g01640.1 View Network Show in Genome Browser |
| Other Names | Os09g0103700 |
| Description | CAX-interacting protein 4, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 456236-457840 Nucleotide Length: 1134 |
| Protein-coding | LOC_Os09g01640 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003676 | nucleic acid binding | Molecular Function | IEA | |
| GO:0005737 | cytoplasm | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g51610 LOC_Os01g37690 LOC_Os02g40460 LOC_Os02g39720 LOC_Os06g46400 LOC_Os02g05660 LOC_Os08g01070 LOC_Os02g02970 LOC_Os06g08840 LOC_Os02g54770 LOC_Os06g48210 More.. |
| Downstream Genes | LOC_Os12g31350 LOC_Os10g39820 LOC_Os10g29560 LOC_Os09g37720 LOC_Os10g11034 LOC_Os12g27070 LOC_Os11g40100 LOC_Os09g02284 LOC_Os09g20900 LOC_Os12g09280 LOC_Os10g41450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g01640.1 |
| Rice Genome Annotation | LOC_Os09g01640.1 |
| Ricechip | LOC_Os09g01640.1 |
| KEGG | osa:4346375 dosa:Os09t0103700-01 |
| Entrez-Gene | 4346375 |