RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g01650.1 View Network Show in Genome Browser |
| Other Names | Os09g0103800 |
| Description | peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 466872-473052 Nucleotide Length: 1638 |
| Protein-coding | LOC_Os09g01650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005730 | nucleolus | Cellular Component | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58020 LOC_Os08g45010 LOC_Os03g32630 LOC_Os04g56330 LOC_Os05g33040 LOC_Os04g46000 |
| Downstream Genes | LOC_Os09g39910 LOC_Os11g06750 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g01650.1 |
| Rice Genome Annotation | LOC_Os09g01650.1 |
| Ricechip | LOC_Os09g01650.1 |
| KEGG | osa:9267062 dosa:Os09t0103800-00 |
| Entrez-Gene | 9267062 |