RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g02214.3 View Network Show in Genome Browser |
| Other Names | Os09g0109800 |
| Description | Citrate transporter protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 878147-890186 Nucleotide Length: 1590 |
| Protein-coding | LOC_Os09g02214 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g07060 LOC_Os03g64350 LOC_Os03g04470 LOC_Os01g55290 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR1436 osa-miR812a osa-miR812b osa-miR812c osa-miR812d osa-miR812e osa-miR1439 osa-miR812o-5p osa-miR812s |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g02214.3 |
| Rice Genome Annotation | LOC_Os09g02214.3 |
| Ricechip | LOC_Os09g02214.3 |
| KEGG | osa:4346388 dosa:Os09t0109800-01 |
| Entrez-Gene | 4346388 |