RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g03310.1 View Network Show in Genome Browser |
| Other Names | Os09g0120800 |
| Description | phospholipid-transporting ATPase 2, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 1612177-1615358 Nucleotide Length: 573 |
| Protein-coding | LOC_Os09g03310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005215 | transporter activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g26954 LOC_Os08g34879 LOC_Os03g36419 LOC_Os06g05870 LOC_Os03g11520 LOC_Os03g12670 LOC_Os06g04399 LOC_Os07g28910 LOC_Os08g41850 LOC_Os08g21590 LOC_Os03g49520 More.. |
| Downstream Genes | LOC_Os11g06934 LOC_Os11g48090 LOC_Os10g29274 LOC_Os12g41962 LOC_Os10g08599 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g03310.1 |
| Rice Genome Annotation | LOC_Os09g03310.1 |
| Ricechip | LOC_Os09g03310.1 |
| KEGG | osa:9272124 dosa:Os09t0120800-01 |
| Entrez-Gene | 9272124 |