RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g03610.3 View Network Show in Genome Browser |
| Other Names | Os09g0123200 |
| Description | flowering time control protein FCA, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 1790600-1799611 Nucleotide Length: 2199 |
| Protein-coding | LOC_Os09g03610 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009790 | embryo development | Biological Process | IEA | |
| GO:0009908 | flower development | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g49190 LOC_Os02g10060 LOC_Os03g27930 LOC_Os02g31140 LOC_Os01g68760 LOC_Os01g25330 LOC_Os01g07740 LOC_Os02g11750 LOC_Os08g45240 LOC_Os04g54440 LOC_Os06g50890 More.. |
| Downstream Genes | LOC_Os11g46240 LOC_Os11g07490 LOC_Os12g43600 LOC_Os10g02630 LOC_Os12g01010 LOC_Os09g37720 LOC_Os11g01020 LOC_Os12g38430 LOC_Os09g29980 |
| Reference | |
|---|---|
| PubMed | 16240176 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g03610.3 |
| Rice Genome Annotation | LOC_Os09g03610.3 |
| Ricechip | LOC_Os09g03610.3 |
| KEGG | osa:4346429 dosa:Os09t0123200-01 |
| Entrez-Gene | 4346429 |