RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g03680.1 View Network Show in Genome Browser |
| Other Names | Os09g0124232,Os09g0124100 |
| Description | ankyrin, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 1850573-1859251 Nucleotide Length: 1218 |
| Protein-coding | LOC_Os09g03680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g44130 LOC_Os03g62200 LOC_Os03g01970 LOC_Os01g65000 LOC_Os02g34580 LOC_Os03g47780 LOC_Os01g61510 LOC_Os05g39240 LOC_Os01g61550 LOC_Os05g41880 LOC_Os07g30240 More.. |
| Downstream Genes | LOC_Os12g01420 LOC_Os09g37120 LOC_Os11g01410 LOC_Os12g01922 LOC_Os09g24220 LOC_Os11g01872 LOC_Os11g34860 LOC_Os10g40590 LOC_Os12g04700 LOC_Os11g04840 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g03680.1 |
| Rice Genome Annotation | LOC_Os09g03680.1 |
| Ricechip | LOC_Os09g03680.1 |
| KEGG | osa:4346432 dosa:Os09t0124232-00dosa:Os09t0124100-00 |