RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g04339.1 View Network Show in Genome Browser |
| Other Names | Os09g0129800,Os09g0129600 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 2297896-2306688 Nucleotide Length: 948 |
| Protein-coding | LOC_Os09g04339 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g12890 LOC_Os01g40860 LOC_Os05g03620 LOC_Os05g51130 LOC_Os03g16950 LOC_Os05g04170 LOC_Os05g49740 LOC_Os07g18120 LOC_Os03g57690 LOC_Os03g16960 LOC_Os03g57680 More.. |
| Downstream Genes | LOC_Os09g20090 LOC_Os09g19734 LOC_Os10g34040 LOC_Os11g38780 LOC_Os10g04860 LOC_Os09g16510 LOC_Os09g37080 LOC_Os11g37920 LOC_Os09g27830 LOC_Os12g39300 LOC_Os10g30860 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g04339.1 |
| Rice Genome Annotation | LOC_Os09g04339.1 |
| Ricechip | LOC_Os09g04339.1 |
| KEGG | osa:9268244 osa:4346446 dosa:Os09t0129800-00dosa:Os09t0129600-01 |
| Entrez-Gene | 9268244 |