RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g04730.1 View Network Show in Genome Browser
Other Names	Os09g0133200
Description	dehydrogenase/reductase SDR family member 2, putative, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 2512441-2517277 Nucleotide Length: 762
Protein-coding	LOC_Os09g04730

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0030154	cell differentiation	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005777	peroxisome	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os03g18590 LOC_Os01g73570 LOC_Os08g43580 LOC_Os01g05840 LOC_Os03g21460 LOC_Os03g63930 LOC_Os07g12150 LOC_Os04g22390 LOC_Os04g22380 LOC_Os05g31290 LOC_Os04g32070 More..
Downstream Genes	LOC_Os11g07930 LOC_Os11g07922 LOC_Os12g34890 LOC_Os12g27830 LOC_Os09g39670 LOC_Os09g36860 LOC_Os10g40020 LOC_Os10g40030 LOC_Os11g31900 LOC_Os12g03270 LOC_Os11g30560 More..

Pathways
KEGG Pathways	rn00010 rn01100 rn01110 rn01120 rn00625 rn00627 rn00626 rn00903 rn00363 rn00624
Metacyc Pathways	PWY-5078 P127-PWY FERMENTATION-PWY PWY-3801 PWY66-21 PWY-5082 PWY-5079 PWY-5057 PWY-5076 ENTBACSYN-PWY

Database Links
Gramene	LOC_Os09g04730.1
Rice Genome Annotation	LOC_Os09g04730.1
Ricechip	LOC_Os09g04730.1
KEGG	osa:4346459 dosa:Os09t0133200-01
Entrez-Gene	4346459