RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g04890.1 View Network Show in Genome Browser |
| Other Names | Os09g0134500 |
| Description | histone-lysine N-methyltransferase, H3 lysine-4 specific ATX1, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 2601650-2615934 Nucleotide Length: 3069 |
| Protein-coding | LOC_Os09g04890 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0016043 | cellular component organization | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003677 | DNA binding | Molecular Function | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g09920 LOC_Os05g38810 LOC_Os05g05660 LOC_Os07g46180 LOC_Os03g24339 LOC_Os02g56130 LOC_Os02g03030 LOC_Os01g73460 LOC_Os07g48610 LOC_Os03g55200 LOC_Os06g03720 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g04890.1 |
| Rice Genome Annotation | LOC_Os09g04890.1 |
| Ricechip | LOC_Os09g04890.1 |
| KEGG | osa:4346464 dosa:Os09t0134500-02 |
| Entrez-Gene | 4346464 |