RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g05020.1 View Network Show in Genome Browser |
| Other Names | Os09g0135700 |
| Description | tyrosine phosphatase family protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 2697267-2702668 Nucleotide Length: 669 |
| Protein-coding | LOC_Os09g05020 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g05870 LOC_Os01g20940 LOC_Os04g49530 LOC_Os03g46390 LOC_Os02g48840 LOC_Os05g42120 LOC_Os02g54020 LOC_Os08g44260 LOC_Os03g44500 LOC_Os06g47260 |
| Downstream Genes | LOC_Os12g21890 LOC_Os12g09120 LOC_Os09g10720 LOC_Os11g04180 LOC_Os12g43550 LOC_Os12g03990 LOC_Os12g07590 LOC_Os11g43640 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g05020.1 |
| Rice Genome Annotation | LOC_Os09g05020.1 |
| Ricechip | LOC_Os09g05020.1 |
| KEGG | osa:4346470 dosa:Os09t0135700-01 |
| Entrez-Gene | 4346470 |