RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g06560.1 View Network Show in Genome Browser |
| Other Names | Os09g0241100 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 3118920-3125244 Nucleotide Length: 3378 |
| Protein-coding | LOC_Os09g06560 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g64820 LOC_Os01g14610 LOC_Os05g13300 LOC_Os03g15810 LOC_Os05g08970 LOC_Os01g08970 LOC_Os01g19480 LOC_Os04g25550 LOC_Os04g49860 LOC_Os08g17294 LOC_Os05g37980 More.. |
| Downstream Genes | LOC_Os11g29380 LOC_Os10g34750 LOC_Os12g26030 LOC_Os11g05570 LOC_Os11g41180 LOC_Os11g38310 LOC_Os09g11450 LOC_Os12g31810 LOC_Os12g41400 LOC_Os09g12570 LOC_Os12g35030 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR414 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g06560.1 |
| Rice Genome Annotation | LOC_Os09g06560.1 |
| Ricechip | LOC_Os09g06560.1 |
| KEGG | osa:4346476 dosa:Os09t0241100-01 |
| Entrez-Gene | 4346476 |