RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g06680.1 View Network Show in Genome Browser |
| Other Names | Os09g0242300 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 3168154-3171995 Nucleotide Length: 1449 |
| Protein-coding | LOC_Os09g06680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0004871 | signal transducer activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g46570 LOC_Os08g04270 LOC_Os07g12320 LOC_Os02g14790 LOC_Os08g18880 LOC_Os03g18840 LOC_Os03g54770 LOC_Os02g42590 LOC_Os01g52640 LOC_Os07g46620 LOC_Os01g44394 More.. |
| Downstream Genes | LOC_Os11g07480 LOC_Os11g08400 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g06680.1 |
| Rice Genome Annotation | LOC_Os09g06680.1 |
| Ricechip | LOC_Os09g06680.1 |
| KEGG | osa:4346480 dosa:Os09t0242300-00 |
| Entrez-Gene | 4346480 |