RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g07300.1 View Network Show in Genome Browser
Other Names
Description	BIG, putative, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 3590118-3607830 Nucleotide Length: 13113
Protein-coding	LOC_Os09g07300

Gene Ontology Classification
GO	Name	Type	Code
GO:0009653	anatomical structure morphogenesis	Biological Process	IEA
GO:0016049	cell growth	Biological Process	IEA
GO:0016043	cellular component organization	Biological Process	IEA
GO:0007275	multicellular organismal development	Biological Process	IEA
GO:0009791	post-embryonic development	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0000003	reproduction	Biological Process	IEA
GO:0009628	response to abiotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009719	response to endogenous stimulus	Biological Process	IEA
GO:0006810	transport	Biological Process	IEA
GO:0005488	binding	Molecular Function	IEA
GO:0003824	catalytic activity	Molecular Function	IEA
GO:0005575	cellular_component	Cellular Component	IEA
GO:0005829	cytosol	Cellular Component	IEA
GO:0016020	membrane	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os06g33810 LOC_Os02g40810 LOC_Os03g51220 LOC_Os03g53960 LOC_Os02g10790 LOC_Os02g48620 LOC_Os03g19960 LOC_Os03g10750 LOC_Os01g01960 LOC_Os03g58700 LOC_Os01g32300 More..
Downstream Genes	LOC_Os10g42320 LOC_Os11g32960 LOC_Os09g33450 LOC_Os09g33980

miRNA Regulations
miRNAs	osa-miR529b

Database Links
Gramene	LOC_Os09g07300.1
Rice Genome Annotation	LOC_Os09g07300.1
Ricechip	LOC_Os09g07300.1