RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g07320.2 View Network Show in Genome Browser |
| Other Names | Os09g0248000 |
| Description | ethanol tolerance protein GEKO1, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 3620063-3633216 Nucleotide Length: 531 |
| Protein-coding | LOC_Os09g07320 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g48590 LOC_Os03g09820 LOC_Os07g19190 LOC_Os01g33050 LOC_Os01g39630 LOC_Os08g43540 LOC_Os06g07978 LOC_Os06g07878 LOC_Os06g07140 LOC_Os04g41040 LOC_Os01g59140 More.. |
| Downstream Genes | LOC_Os11g29190 LOC_Os09g32532 LOC_Os09g32520 LOC_Os09g32500 LOC_Os11g40140 LOC_Os10g29660 LOC_Os09g36710 LOC_Os12g39070 LOC_Os11g08940 LOC_Os12g21798 |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR818a osa-miR818b osa-miR818c osa-miR818d osa-miR818e osa-miR1436 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g07320.2 |
| Rice Genome Annotation | LOC_Os09g07320.2 |
| Ricechip | LOC_Os09g07320.2 |
| KEGG | osa:4346498 dosa:Os09t0248000-03 |
| Entrez-Gene | 4346498 |