RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g07800.1 View Network Show in Genome Browser |
| Other Names | Os09g0251800 |
| Description | expressed protein |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 3949844-3953272 Nucleotide Length: 516 |
| Protein-coding | LOC_Os09g07800 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| GO:0005773 | vacuole | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g09840 LOC_Os02g57000 LOC_Os01g72420 LOC_Os01g63470 LOC_Os01g47040 LOC_Os01g70790 |
| Downstream Genes | LOC_Os09g39770 LOC_Os09g35780 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g07800.1 |
| Rice Genome Annotation | LOC_Os09g07800.1 |
| Ricechip | LOC_Os09g07800.1 |
| KEGG | osa:4346518 dosa:Os09t0251800-01 |
| Entrez-Gene | 4346518 |