RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g07820.3 View Network Show in Genome Browser |
| Other Names | Os09g0252000 |
| Description | exosome complex exonuclease, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 3959855-3965192 Nucleotide Length: 672 |
| Protein-coding | LOC_Os09g07820 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0004518 | nuclease activity | Molecular Function | IEA | |
| GO:0003723 | RNA binding | Molecular Function | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g34570 LOC_Os06g48750 LOC_Os03g63720 LOC_Os02g05330 LOC_Os03g06190 LOC_Os04g43922 LOC_Os03g03710 LOC_Os02g57070 LOC_Os03g22880 LOC_Os01g66730 LOC_Os01g47256 More.. |
| Downstream Genes | LOC_Os10g31940 LOC_Os10g10434 LOC_Os12g21500 LOC_Os12g17070 LOC_Os10g30100 LOC_Os11g20689 LOC_Os09g37860 LOC_Os12g08260 LOC_Os12g13390 LOC_Os11g14220 LOC_Os11g26850 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g07820.3 |
| Rice Genome Annotation | LOC_Os09g07820.3 |
| Ricechip | LOC_Os09g07820.3 |
| KEGG | osa:4346519 dosa:Os09t0252000-00 |
| Entrez-Gene | 4346519 |