RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g07910.1 View Network Show in Genome Browser |
| Other Names | |
| Description | DNA-directed RNA polymerase subunit alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 4037616-4038693 Nucleotide Length: 774 |
| Protein-coding | LOC_Os09g07910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g60100 LOC_Os01g62210 LOC_Os05g38580 LOC_Os03g26860 LOC_Os01g42640 LOC_Os02g33140 LOC_Os02g06700 LOC_Os03g49710 LOC_Os07g07709 LOC_Os03g58050 LOC_Os08g15460 More.. |
| Downstream Genes | LOC_Os12g42180 LOC_Os09g19954 LOC_Os12g04160 LOC_Os11g04370 LOC_Os11g37510 LOC_Os11g38959 LOC_Os12g30490 LOC_Os09g17840 LOC_Os09g17830 LOC_Os09g19952 LOC_Os12g33240 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g07910.1 |
| Rice Genome Annotation | LOC_Os09g07910.1 |
| Ricechip | LOC_Os09g07910.1 |