RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g08660.1 View Network Show in Genome Browser |
| Other Names | Os09g0261300 |
| Description | 4-nitrophenylphosphatase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 4534955-4543655 Nucleotide Length: 912 |
| Protein-coding | LOC_Os09g08660 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g58010 LOC_Os05g06350 LOC_Os06g45440 LOC_Os03g16670 LOC_Os02g57100 LOC_Os03g17590 LOC_Os01g14950 LOC_Os08g14580 LOC_Os01g01120 LOC_Os02g07730 LOC_Os04g51610 More.. |
| Downstream Genes | LOC_Os12g16350 LOC_Os10g41930 LOC_Os11g41160 LOC_Os12g44150 LOC_Os12g31820 LOC_Os11g29380 LOC_Os12g05050 LOC_Os09g24230 LOC_Os12g07720 LOC_Os12g31380 LOC_Os10g34750 More.. |
| Pathways | |
|---|---|
| Metacyc Pathways | PWY-181 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g08660.1 |
| Rice Genome Annotation | LOC_Os09g08660.1 |
| Ricechip | LOC_Os09g08660.1 |
| KEGG | osa:4346547 dosa:Os09t0261300-01 |
| Entrez-Gene | 4346547 |