RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g08910.1 View Network Show in Genome Browser |
| Other Names | |
| Description | ATP synthase, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 4725507-4730885 Nucleotide Length: 1530 |
| Protein-coding | LOC_Os09g08910 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0005488 | binding | Molecular Function | IEA | |
| GO:0005618 | cell wall | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| GO:0005739 | mitochondrion | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g49190 LOC_Os05g47980 LOC_Os06g43850 LOC_Os07g31300 LOC_Os01g51380 LOC_Os06g37180 LOC_Os03g51600 LOC_Os07g32880 LOC_Os02g51470 LOC_Os06g39740 LOC_Os05g35320 More.. |
| Downstream Genes | LOC_Os10g17280 LOC_Os12g10570 LOC_Os12g19430 LOC_Os11g26850 LOC_Os11g14220 LOC_Os11g09280 LOC_Os10g42840 LOC_Os12g43630 LOC_Os11g04070 LOC_Os12g03880 LOC_Os12g08260 More.. |
| miRNA Regulations | |
|---|---|
| miRNAs | osa-miR5539a osa-miR5539b |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g08910.1 |
| Rice Genome Annotation | LOC_Os09g08910.1 |
| Ricechip | LOC_Os09g08910.1 |