RiceNetDB

RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.

General Information
Locus Name	LOC_Os09g09220.1 View Network Show in Genome Browser
Other Names	Os09g0265500,Os09g0264950
Description	protein kinase domain containing protein, expressed
Gene Attributes	Chromosome: Chr9 CDS Coordinates (5'-3'): 4933507-4942200 Nucleotide Length: 2529
Protein-coding	LOC_Os09g09220

Gene Ontology Classification
GO	Name	Type	Code
GO:0009987	cellular process	Biological Process	IEA
GO:0009987	cellular process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0008152	metabolic process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0006464	protein modification process	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0009607	response to biotic stimulus	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0006950	response to stress	Biological Process	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0016301	kinase activity	Molecular Function	IEA
GO:0005623	cell	Cellular Component	IEA
GO:0005623	cell	Cellular Component	IEA

Regulatory Genes ( Show Network In Viewer )
Upstream Genes	LOC_Os02g05630 LOC_Os07g32380 LOC_Os06g48300 LOC_Os06g33549 LOC_Os02g15594 LOC_Os06g44210 LOC_Os04g56450 LOC_Os02g55560 LOC_Os04g37904 LOC_Os03g18150 LOC_Os05g50970 More..
Downstream Genes	LOC_Os10g39540 LOC_Os09g30100 LOC_Os09g32810 LOC_Os09g38550 LOC_Os10g41480 LOC_Os11g13820 LOC_Os12g33100 LOC_Os11g03390 LOC_Os12g03070

miRNA Regulations
miRNAs	osa-miR5788

Database Links
Gramene	LOC_Os09g09220.1
Rice Genome Annotation	LOC_Os09g09220.1
Ricechip	LOC_Os09g09220.1