RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g09480.2 View Network Show in Genome Browser |
| Other Names | Os09g0267600 |
| Description | SNF7 domain containing protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 5103023-5106862 Nucleotide Length: 663 |
| Protein-coding | LOC_Os09g09480 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006810 | transport | Biological Process | IEA | |
| GO:0005768 | endosome | Cellular Component | IEA | |
| GO:0016020 | membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g01810 LOC_Os07g29630 LOC_Os07g13270 LOC_Os06g43590 LOC_Os02g38300 LOC_Os03g43860 LOC_Os01g18280 LOC_Os03g57210 LOC_Os03g21460 LOC_Os02g06490 LOC_Os05g41510 More.. |
| Downstream Genes | LOC_Os10g33660 LOC_Os10g35250 LOC_Os11g47710 LOC_Os11g26910 LOC_Os10g10990 LOC_Os10g39120 LOC_Os11g40140 LOC_Os11g20384 LOC_Os12g02830 LOC_Os11g03060 LOC_Os09g36830 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g09480.2 |
| Rice Genome Annotation | LOC_Os09g09480.2 |
| Ricechip | LOC_Os09g09480.2 |
| KEGG | osa:4346566 dosa:Os09t0267600-01 |
| Entrez-Gene | 4346566 |