RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g10720.1 View Network Show in Genome Browser |
| Other Names | Os09g0279100 |
| Description | AP2-associated protein kinase 1, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 5847603-5851899 Nucleotide Length: 2037 |
| Protein-coding | LOC_Os09g10720 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g33549 LOC_Os02g15594 LOC_Os06g48300 LOC_Os04g56450 LOC_Os02g05630 LOC_Os04g37904 LOC_Os04g52000 LOC_Os07g32380 LOC_Os06g44210 LOC_Os03g57450 LOC_Os07g44710 More.. |
| Downstream Genes | LOC_Os09g20640 LOC_Os12g12860 LOC_Os10g42950 LOC_Os12g30150 LOC_Os09g30150 LOC_Os11g07040 LOC_Os12g07230 LOC_Os10g36710 LOC_Os09g38550 LOC_Os09g33910 LOC_Os12g03970 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g10720.1 |
| Rice Genome Annotation | LOC_Os09g10720.1 |
| Ricechip | LOC_Os09g10720.1 |
| KEGG | osa:4346601 dosa:Os09t0279100-01 |
| Entrez-Gene | 4346601 |