RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g10850.1 View Network Show in Genome Browser |
| Other Names | Os09g0280600 |
| Description | meiotic coiled-coil protein 7, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 5935331-5940418 Nucleotide Length: 708 |
| Protein-coding | LOC_Os09g10850 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0006259 | DNA metabolic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0009628 | response to abiotic stimulus | Biological Process | IEA | |
| GO:0006950 | response to stress | Biological Process | IEA | |
| GO:0003674 | molecular_function | Molecular Function | IEA | |
| GO:0005515 | protein binding | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os08g12760 LOC_Os04g51940 LOC_Os01g57360 LOC_Os03g02720 LOC_Os01g52790 LOC_Os03g10570 LOC_Os04g40290 LOC_Os03g54091 LOC_Os05g42270 LOC_Os03g51000 LOC_Os02g04320 More.. |
| Downstream Genes | LOC_Os11g04954 LOC_Os12g04980 LOC_Os11g34300 LOC_Os12g09000 LOC_Os12g41350 LOC_Os11g16580 LOC_Os10g05220 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g10850.1 |
| Rice Genome Annotation | LOC_Os09g10850.1 |
| Ricechip | LOC_Os09g10850.1 |
| KEGG | osa:4346611 dosa:Os09t0280600-01 |
| Entrez-Gene | 4346611 |