RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g12290.1 View Network Show in Genome Browser |
| Other Names | Os09g0294000 |
| Description | bifunctional aspartokinase/homoserine dehydrogenase, chloroplast precursor, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 6995049-7009516 Nucleotide Length: 2748 |
| Protein-coding | LOC_Os09g12290 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g58510 LOC_Os07g20544 LOC_Os03g55280 LOC_Os05g42350 LOC_Os05g05840 LOC_Os02g10350 LOC_Os03g63330 LOC_Os01g65260 LOC_Os01g70300 LOC_Os04g28420 LOC_Os02g04320 More.. |
| Downstream Genes | LOC_Os12g42876 LOC_Os12g42884 LOC_Os11g26910 LOC_Os09g36830 LOC_Os09g30410 LOC_Os12g36950 LOC_Os10g25010 LOC_Os11g04220 LOC_Os09g30418 LOC_Os09g30412 LOC_Os12g41820 More.. |
| Pathways | |
|---|---|
| KEGG Pathways | rn00260 rn00270 rn00300 rn01100 rn01110 rn01120 rn01210 |
| Metacyc Pathways | DAPLYSINESYN-PWY PWY-5097 PWY-2941 HOMOSERSYN-PWY P101-PWY PWY-2942 PWY-6562 PWY-6559 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g12290.1 |
| Rice Genome Annotation | LOC_Os09g12290.1 |
| Ricechip | LOC_Os09g12290.1 |
| KEGG | osa:4346642 dosa:Os09t0294000-01 |
| Entrez-Gene | 4346642 |