RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g12310.1 View Network Show in Genome Browser |
| Other Names | Os09g0294300 |
| Description | ubiquitin-conjugating enzyme domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 7017623-7020985 Nucleotide Length: 1122 |
| Protein-coding | LOC_Os09g12310 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0019538 | protein metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os06g47350 LOC_Os03g13770 LOC_Os03g63920 LOC_Os04g52690 LOC_Os06g47320 LOC_Os02g02720 LOC_Os05g32360 LOC_Os01g72790 LOC_Os08g17600 |
| Downstream Genes | LOC_Os12g39650 LOC_Os12g38630 LOC_Os10g33710 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g12310.1 |
| Rice Genome Annotation | LOC_Os09g12310.1 |
| Ricechip | LOC_Os09g12310.1 |
| KEGG | osa:4346643 dosa:Os09t0294300-01 |
| Entrez-Gene | 4346643 |