RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g12530.1 View Network Show in Genome Browser |
| Other Names | Os09g0296700 |
| Description | glycosyl transferase, group 1 domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 7179963-7181868 Nucleotide Length: 1464 |
| Protein-coding | LOC_Os09g12530 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g46430 LOC_Os01g69030 LOC_Os08g20660 LOC_Os04g34000 LOC_Os03g11560 LOC_Os03g08300 LOC_Os01g43380 LOC_Os06g09450 LOC_Os06g06560 LOC_Os04g24430 LOC_Os03g22120 More.. |
| Downstream Genes | LOC_Os12g39340 LOC_Os10g30156 LOC_Os11g12810 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g12530.1 |
| Rice Genome Annotation | LOC_Os09g12530.1 |
| Ricechip | LOC_Os09g12530.1 |
| KEGG | osa:4346648 dosa:Os09t0296700-01 |
| Entrez-Gene | 4346648 |