RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g12650.1 View Network Show in Genome Browser |
| Other Names | Os09g0298100 |
| Description | pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 7240238-7245003 Nucleotide Length: 1722 |
| Protein-coding | LOC_Os09g12650 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0005975 | carbohydrate metabolic process | Biological Process | IEA | |
| GO:0009056 | catabolic process | Biological Process | IEA | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0006091 | generation of precursor metabolites and energy | Biological Process | IEA | |
| GO:0015979 | photosynthesis | Biological Process | IEA | |
| GO:0016301 | kinase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005829 | cytosol | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g16960 LOC_Os03g20880 LOC_Os04g58110 LOC_Os01g47080 LOC_Os03g46910 LOC_Os07g08340 |
| Downstream Genes | LOC_Os12g05110 LOC_Os11g05110 LOC_Os11g10980 LOC_Os10g42100 LOC_Os09g36450 |
| Pathways | |
|---|---|
| KEGG Pathways | rn00051 |
| Metacyc Pathways | PWY-1042 PWY-6531 ANAEROFRUCAT-PWY PWY-3801 GLYCOLYSIS |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g12650.1 |
| Rice Genome Annotation | LOC_Os09g12650.1 |
| Ricechip | LOC_Os09g12650.1 |
| KEGG | osa:9271821 dosa:Os09t0298100-00 |
| Entrez-Gene | 9271821 |