RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g12710.1 View Network Show in Genome Browser |
| Other Names | Os09g0298400 |
| Description | WD domain, G-beta repeat domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 7271228-7276920 Nucleotide Length: 999 |
| Protein-coding | LOC_Os09g12710 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0040029 | regulation of gene expression, epigenetic | Biological Process | IEA | |
| GO:0000166 | nucleotide binding | Molecular Function | IEA | |
| GO:0005622 | intracellular | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g68810 LOC_Os03g17010 LOC_Os03g01970 LOC_Os01g36920 LOC_Os01g36890 LOC_Os03g14520 LOC_Os02g58640 LOC_Os02g04480 LOC_Os07g33340 LOC_Os07g20544 LOC_Os08g04280 More.. |
| Downstream Genes | LOC_Os09g33986 LOC_Os12g42150 LOC_Os09g39420 LOC_Os12g06810 LOC_Os12g03822 LOC_Os11g03990 LOC_Os12g19590 LOC_Os10g01540 LOC_Os11g07480 LOC_Os11g38170 LOC_Os12g07450 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g12710.1 |
| Rice Genome Annotation | LOC_Os09g12710.1 |
| Ricechip | LOC_Os09g12710.1 |
| KEGG | osa:4346657 dosa:Os09t0298400-01 |
| Entrez-Gene | 4346657 |