RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g13680.1 View Network Show in Genome Browser |
| Other Names | Os09g0307400 |
| Description | ZOS9-04 - C2H2 zinc finger protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 7995738-7996963 Nucleotide Length: 1158 |
| Protein-coding | LOC_Os09g13680 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0009058 | biosynthetic process | Biological Process | IEA | |
| GO:0007275 | multicellular organismal development | Biological Process | IEA | |
| GO:0006139 | nucleobase, nucleoside, nucleotide and nucleic acid metabolic process | Biological Process | IEA | |
| GO:0003700 | sequence-specific DNA binding transcription factor activity | Molecular Function | IEA | |
| GO:0005634 | nucleus | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os05g05860 LOC_Os04g52270 LOC_Os03g17590 LOC_Os01g70310 LOC_Os01g27730 LOC_Os02g56740 LOC_Os04g08340 LOC_Os08g01930 LOC_Os06g16260 LOC_Os05g23260 LOC_Os08g44480 More.. |
| Downstream Genes | LOC_Os11g40500 LOC_Os11g05562 LOC_Os11g43640 LOC_Os11g32100 LOC_Os09g39540 LOC_Os09g31180 LOC_Os09g37230 LOC_Os09g23370 LOC_Os10g39750 LOC_Os09g24690 LOC_Os10g29540 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g13680.1 |
| Rice Genome Annotation | LOC_Os09g13680.1 |
| Ricechip | LOC_Os09g13680.1 |
| KEGG | dosa:Os09t0307400-00 |