RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g13740.2 View Network Show in Genome Browser |
| Other Names | Os09g0307800 |
| Description | SET domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 8041147-8046950 Nucleotide Length: 1164 |
| Protein-coding | LOC_Os09g13740 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0016740 | transferase activity | Molecular Function | IEA | |
| GO:0005575 | cellular_component | Cellular Component | IEA | |
| GO:0005783 | endoplasmic reticulum | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os02g52460 LOC_Os08g01054 LOC_Os07g46180 LOC_Os03g24339 LOC_Os05g05860 LOC_Os01g64490 LOC_Os04g01970 LOC_Os08g44450 LOC_Os08g44380 LOC_Os06g03676 LOC_Os03g49730 More.. |
| Downstream Genes | LOC_Os11g34310 LOC_Os12g39980 LOC_Os10g10990 LOC_Os09g27370 LOC_Os09g33980 LOC_Os11g11070 LOC_Os10g42950 LOC_Os10g08022 |
| Reference | |
|---|---|
| PubMed | 22892321 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g13740.2 |
| Rice Genome Annotation | LOC_Os09g13740.2 |
| Ricechip | LOC_Os09g13740.2 |
| KEGG | osa:4346677 dosa:Os09t0307800-01 |
| Entrez-Gene | 4346677 |