RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g13870.1 View Network Show in Genome Browser |
| Other Names | Os09g0308900 |
| Description | lipid phosphatase protein, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 8151807-8158350 Nucleotide Length: 924 |
| Protein-coding | LOC_Os09g13870 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0009719 | response to endogenous stimulus | Biological Process | IEA | |
| GO:0007165 | signal transduction | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005886 | plasma membrane | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os03g59070 LOC_Os03g17940 LOC_Os02g44290 LOC_Os03g21690 LOC_Os01g37910 LOC_Os01g73530 LOC_Os08g22354 LOC_Os04g42600 LOC_Os02g18850 LOC_Os07g12890 LOC_Os01g71990 More.. |
| Downstream Genes | LOC_Os11g34360 LOC_Os10g39120 LOC_Os12g13320 LOC_Os10g10244 |
| Pathways | |
|---|---|
| Metacyc Pathways | PHOSLIPSYN2-PWY TRIGLSYN-PWY |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g13870.1 |
| Rice Genome Annotation | LOC_Os09g13870.1 |
| Ricechip | LOC_Os09g13870.1 |
| KEGG | osa:4346680 dosa:Os09t0308900-01 |
| Entrez-Gene | 4346680 |