RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g15340.1 View Network Show in Genome Browser |
| Other Names | Os09g0322200 |
| Description | hydrolase, NUDIX family, domain containing protein, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 9379745-9383838 Nucleotide Length: 1101 |
| Protein-coding | LOC_Os09g15340 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0008150 | biological_process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0009536 | plastid | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os07g36190 LOC_Os06g14420 LOC_Os08g28840 LOC_Os02g56210 LOC_Os05g34180 LOC_Os06g09240 LOC_Os01g37470 LOC_Os02g50130 LOC_Os03g61760 LOC_Os08g28860 LOC_Os02g13560 More.. |
| Downstream Genes | LOC_Os09g35730 LOC_Os11g27329 LOC_Os11g27264 LOC_Os10g01110 LOC_Os11g32750 LOC_Os10g35180 LOC_Os09g29404 LOC_Os09g25900 LOC_Os12g10510 |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g15340.1 |
| Rice Genome Annotation | LOC_Os09g15340.1 |
| Ricechip | LOC_Os09g15340.1 |
| KEGG | osa:4346716 dosa:Os09t0322200-01 |
| Entrez-Gene | 4346716 |