RiceNetDB is currently the most comprehensive regulatory database on Oryza Sativa based on genome annotation. It was displayed in three levels: GEM, PPIs and GRNs to facilitate biomolecular regulatory analysis and gene-metabolite mapping.
| General Information | |
|---|---|
| Locus Name | LOC_Os09g15670.1 View Network Show in Genome Browser |
| Other Names | Os09g0325700 |
| Description | protein phosphatase 2C, putative, expressed |
| Gene Attributes | Chromosome: Chr9 CDS Coordinates (5'-3'): 9567471-9568905 Nucleotide Length: 1077 |
| Protein-coding | LOC_Os09g15670 |
| Gene Ontology Classification | ||||
|---|---|---|---|---|
| GO | Name | Type | Code | |
| GO:0009987 | cellular process | Biological Process | IEA | |
| GO:0008152 | metabolic process | Biological Process | IEA | |
| GO:0006464 | protein modification process | Biological Process | IEA | |
| GO:0003824 | catalytic activity | Molecular Function | IEA | |
| GO:0016787 | hydrolase activity | Molecular Function | IEA | |
| GO:0005623 | cell | Cellular Component | IEA | |
| Regulatory Genes ( Show Network In Viewer ) | |
|---|---|
| Upstream Genes | LOC_Os01g50910 LOC_Os01g11600 LOC_Os02g43330 LOC_Os05g06990 LOC_Os01g55450 LOC_Os02g40860 LOC_Os05g20150 LOC_Os01g56330 LOC_Os02g56560 LOC_Os05g03620 LOC_Os05g48660 More.. |
| Downstream Genes | LOC_Os12g03810 LOC_Os11g03970 LOC_Os11g39450 LOC_Os09g15700 LOC_Os10g33650 LOC_Os11g07160 LOC_Os11g07140 LOC_Os12g19290 LOC_Os11g36180 LOC_Os12g03070 LOC_Os11g07250 More.. |
| Database Links | |
|---|---|
| Gramene | LOC_Os09g15670.1 |
| Rice Genome Annotation | LOC_Os09g15670.1 |
| Ricechip | LOC_Os09g15670.1 |
| KEGG | osa:4346736 dosa:Os09t0325700-01 |
| Entrez-Gene | 4346736 |